Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 CHCHD2P8-201ENST00000429873 447 ntBASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 AP002383.4-201ENST00000442518 975 ntBASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 KRT18P1-202ENST00000452408 1331 ntBASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 MIR3180-1-201ENST00000580374 94 ntBASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 MIR3180-3-201ENST00000584616 94 ntBASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 AL691432.3-201ENST00000621860 400 ntBASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 Z83836.1-201ENST00000624605 1642 ntBASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA3F8WFD2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 PVRIG2P-201ENST00000435460 978 ntBASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 TPM4P1-201ENST00000436100 807 ntBASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 AP003733.1-201ENST00000491725 852 ntBASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 AC112777.1-201ENST00000540175 1423 ntBASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA3F8WFD2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPA3F8WFD2 MIR3180-4-201ENST00000582223 153 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms