Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC004263.2-201ENST00000617183 678 ntBASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 RNF126P1-202ENST00000569893 925 ntBASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 GPR32P1-201ENST00000601788 811 ntBASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 AL390719.2-201ENST00000606993 987 ntBASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV5-4A0A0C4DH59 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 AL645929.1-201ENST00000420084 975 ntBASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 SLC25A6P5-201ENST00000435663 894 ntBASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 AP000997.3-201ENST00000623333 2250 ntBASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-4A0A0C4DH59 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms