Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 AP003071.4-201ENST00000562276 1284 ntBASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 AC036111.1-201ENST00000533973 1582 ntBASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 AC138028.4-201ENST00000564984 1845 ntBASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-2A0A0B4J237 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
TRAV8-2A0A0B4J237 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV8-2A0A0B4J237 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV8-2A0A0B4J237 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AC106820.2-201ENST00000563775 3264 ntBASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AC099343.3-201ENST00000605834 2503 ntBASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AL023803.3-201ENST00000615559 522 ntBASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-2A0A0B4J237 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 GMCL1P1-201ENST00000463439 1581 ntBASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-2A0A0B4J237 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms