Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC008764.6-201ENST00000595909 2069 ntBASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AL355355.2-201ENST00000442321 338 ntBASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MIR4785-201ENST00000585005 73 ntBASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC099398.1-201ENST00000567919 2776 ntBASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FSCN1P1-201ENST00000568912 1481 ntBASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ESPNP-201ENST00000270691 2015 ntBASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms