Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 AC090340.1-201ENST00000620778 4980 ntBASIC16.23■□□□□ 0.19
CLCF1Q9UBD9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 Z69720.1-201ENST00000601483 472 ntBASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCF1Q9UBD9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 AC104819.1-201ENST00000504587 486 ntBASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 AL121894.2-201ENST00000602977 491 ntBASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 AL691432.3-201ENST00000621860 400 ntBASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 CROCCP3-202ENST00000420820 1947 ntBASIC16.21■□□□□ 0.19
CLCF1Q9UBD9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCF1Q9UBD9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCF1Q9UBD9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCF1Q9UBD9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CLCF1Q9UBD9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCF1Q9UBD9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.21■□□□□ 0.18
CLCF1Q9UBD9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 LINC01126-201ENST00000623515 1646 ntBASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AL845331.1-201ENST00000424978 1190 ntBASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AC246785.2-201ENST00000432512 513 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms