Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 AL592071.1-201ENST00000611956 408 ntBASIC16.76■□□□□ 0.27
LRFN1Q9P244 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 AL499627.1-201ENST00000569373 2188 ntBASIC16.76■□□□□ 0.27
LRFN1Q9P244 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRFN1Q9P244 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AC087289.5-201ENST00000586076 3175 ntBASIC16.75■□□□□ 0.27
LRFN1Q9P244 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AC104819.1-201ENST00000504587 486 ntBASIC16.75■□□□□ 0.27
LRFN1Q9P244 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 Z69720.1-201ENST00000601483 472 ntBASIC16.75■□□□□ 0.27
LRFN1Q9P244 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.75■□□□□ 0.27
LRFN1Q9P244 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRFN1Q9P244 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 SDHAP2-201ENST00000455183 2001 ntBASIC16.74■□□□□ 0.27
LRFN1Q9P244 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 VENTXP7-201ENST00000475503 772 ntBASIC16.74■□□□□ 0.27
LRFN1Q9P244 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 AC111152.3-201ENST00000569699 673 ntBASIC16.74■□□□□ 0.27
LRFN1Q9P244 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 AC004263.2-201ENST00000617183 678 ntBASIC16.74■□□□□ 0.27
LRFN1Q9P244 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN1Q9P244 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
LRFN1Q9P244 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms