Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 AP000692.2-201ENST00000608391 879 ntBASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 AC093677.2-201ENST00000600169 1863 ntBASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 AC138028.4-201ENST00000564984 1845 ntBASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 RBM17P1-201ENST00000453646 1190 ntBASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 AL355075.4-201ENST00000554988 638 ntBASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 ESPNP-201ENST00000270691 2015 ntBASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 RCC2P3-201ENST00000418112 1537 ntBASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
LIN7CQ9NUP9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 MYLKP1-201ENST00000509077 1580 ntBASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIN7CQ9NUP9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIN7CQ9NUP9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
LIN7CQ9NUP9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LIN7CQ9NUP9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms