Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SNX18-202ENST00000343017 3140 ntBASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42SE1Q9NRR8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 AC015656.1-201ENST00000624209 3578 ntBASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 AC006449.5-201ENST00000610658 2098 ntBASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms