Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 ARMC10P1-201ENST00000313754 855 ntBASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 SLC25A6P5-201ENST00000435663 894 ntBASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 AL445228.2-201ENST00000605589 952 ntBASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEUROD4Q9HD90 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 REXO1L9P-201ENST00000604264 2108 ntBASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 FLJ13224-201ENST00000313737 1514 ntBASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 AC128688.1-201ENST00000487626 519 ntBASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 EGLN1P1-201ENST00000531623 762 ntBASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.27■□□□□ 0.36
NEUROD4Q9HD90 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEUROD4Q9HD90 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 AC068880.1-201ENST00000507289 2297 ntBASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 AC112497.1-201ENST00000624824 639 ntBASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 AL133373.2-201ENST00000623187 2828 ntBASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEUROD4Q9HD90 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms