Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBE2OQ9C0C9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2OQ9C0C9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 HLA-J-203ENST00000494367 1087 ntBASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 MIR3180-4-201ENST00000582223 153 ntBASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 RCC2P3-201ENST00000418112 1537 ntBASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBE2OQ9C0C9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 OR7E14P-202ENST00000530490 1290 ntBASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2OQ9C0C9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 AC023274.1-201ENST00000418278 595 ntBASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 AC007967.2-201ENST00000432613 625 ntBASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 SNHG9-202ENST00000564014 471 ntBASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 KRT89P-201ENST00000620027 1478 ntBASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2OQ9C0C9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 AC012640.2-201ENST00000561606 901 ntBASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.08■□□□□ 0.81
UBE2OQ9C0C9 SDHAP1-207ENST00000440850 2000 ntBASIC20.08■□□□□ 0.8
UBE2OQ9C0C9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBE2OQ9C0C9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBE2OQ9C0C9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBE2OQ9C0C9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 TP73-AS1-210ENST00000637775 1455 ntBASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms