Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 AC092910.1-201ENST00000482027 1129 ntBASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH11YQ9BZA8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH11YQ9BZA8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AC112698.1-201ENST00000510299 916 ntBASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AC008735.5-201ENST00000623544 497 ntBASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDH11YQ9BZA8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 AL591424.1-201ENST00000442569 1213 ntBASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 Z83851.2-201ENST00000609564 659 ntBASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH11YQ9BZA8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 AL356488.2-201ENST00000602755 427 ntBASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH11YQ9BZA8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PCDH11YQ9BZA8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 AC005104.2-201ENST00000427818 678 ntBASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms