Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 MIR662-201ENST00000384847 95 ntBASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 AC011498.5-201ENST00000592027 486 ntBASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 MYLKP1-201ENST00000509077 1580 ntBASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 AC093525.10-201ENST00000625130 1569 ntBASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 AC007613.1-201ENST00000572811 2597 ntBASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 BX276092.5-203ENST00000456199 560 ntBASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSBP3Q9BWW4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 MIR149-201ENST00000384879 89 ntBASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 KRT18P48-201ENST00000434763 852 ntBASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 AP003733.1-201ENST00000491725 852 ntBASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 AL121672.3-201ENST00000608644 468 ntBASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 AC009102.3-201ENST00000623118 1491 ntBASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSBP3Q9BWW4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms