Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP4Q9BWG4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP4Q9BWG4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 UBALD1-205ENST00000590891 2641 ntBASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC004911.1-201ENST00000416316 871 ntBASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 HEIH-201ENST00000623091 1652 ntBASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP4Q9BWG4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP4Q9BWG4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms