Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD9AQ99638 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RAD9AQ99638 AL024508.2-201ENST00000607749 1894 ntBASIC19.47■□□□□ 0.71
RAD9AQ99638 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAD9AQ99638 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD9AQ99638 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAD9AQ99638 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAD9AQ99638 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.47■□□□□ 0.71
RAD9AQ99638 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.47■□□□□ 0.71
RAD9AQ99638 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.47■□□□□ 0.71
RAD9AQ99638 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAD9AQ99638 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD9AQ99638 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.46■□□□□ 0.71
RAD9AQ99638 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD9AQ99638 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.46■□□□□ 0.71
RAD9AQ99638 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD9AQ99638 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD9AQ99638 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.46■□□□□ 0.71
RAD9AQ99638 AC004832.2-201ENST00000426397 482 ntBASIC19.46■□□□□ 0.71
RAD9AQ99638 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.46■□□□□ 0.71
RAD9AQ99638 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.46■□□□□ 0.71
RAD9AQ99638 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAD9AQ99638 NKAPP1-205ENST00000585790 367 ntBASIC19.46■□□□□ 0.71
RAD9AQ99638 AC134684.3-201ENST00000641758 218 ntBASIC19.46■□□□□ 0.71
RAD9AQ99638 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAD9AQ99638 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD9AQ99638 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAD9AQ99638 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.46■□□□□ 0.71
RAD9AQ99638 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD9AQ99638 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
RAD9AQ99638 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAD9AQ99638 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RAD9AQ99638 SDHAP2-201ENST00000455183 2001 ntBASIC19.46■□□□□ 0.71
RAD9AQ99638 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAD9AQ99638 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.45■□□□□ 0.7
RAD9AQ99638 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.45■□□□□ 0.7
RAD9AQ99638 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RAD9AQ99638 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RAD9AQ99638 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RAD9AQ99638 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RAD9AQ99638 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.45■□□□□ 0.7
RAD9AQ99638 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.45■□□□□ 0.7
RAD9AQ99638 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
RAD9AQ99638 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.45■□□□□ 0.7
RAD9AQ99638 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
RAD9AQ99638 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.45■□□□□ 0.7
RAD9AQ99638 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.45■□□□□ 0.7
RAD9AQ99638 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.45■□□□□ 0.7
RAD9AQ99638 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAD9AQ99638 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAD9AQ99638 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.44■□□□□ 0.7
RAD9AQ99638 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 LINC00602-201ENST00000629776 2065 ntBASIC19.44■□□□□ 0.7
RAD9AQ99638 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.44■□□□□ 0.7
RAD9AQ99638 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.44■□□□□ 0.7
RAD9AQ99638 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.44■□□□□ 0.7
RAD9AQ99638 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.44■□□□□ 0.7
RAD9AQ99638 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.44■□□□□ 0.7
RAD9AQ99638 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.44■□□□□ 0.7
RAD9AQ99638 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.44■□□□□ 0.7
RAD9AQ99638 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.44■□□□□ 0.7
RAD9AQ99638 AC002347.1-201ENST00000569543 541 ntBASIC19.44■□□□□ 0.7
RAD9AQ99638 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.44■□□□□ 0.7
RAD9AQ99638 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 AC022898.2-201ENST00000616822 1312 ntBASIC19.44■□□□□ 0.7
RAD9AQ99638 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAD9AQ99638 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
RAD9AQ99638 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAD9AQ99638 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD9AQ99638 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD9AQ99638 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAD9AQ99638 AP002414.3-201ENST00000589352 1468 ntBASIC19.43■□□□□ 0.7
RAD9AQ99638 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms