Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.12■□□□□ 0.01
S1PR3Q99500 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.12■□□□□ 0.01
S1PR3Q99500 MMP23A-201ENST00000234610 1017 ntBASIC15.12■□□□□ 0.01
S1PR3Q99500 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.12■□□□□ 0.01
S1PR3Q99500 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
S1PR3Q99500 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.12■□□□□ 0.01
S1PR3Q99500 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.12■□□□□ 0.01
S1PR3Q99500 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
S1PR3Q99500 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.11■□□□□ 0.01
S1PR3Q99500 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
S1PR3Q99500 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.11■□□□□ 0.01
S1PR3Q99500 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
S1PR3Q99500 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
S1PR3Q99500 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.11■□□□□ 0.01
S1PR3Q99500 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.11■□□□□ 0.01
S1PR3Q99500 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.11■□□□□ 0.01
S1PR3Q99500 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 BX088651.1-201ENST00000540551 451 ntBASIC15.11■□□□□ 0.01
S1PR3Q99500 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.11■□□□□ 0.01
S1PR3Q99500 C2orf69P3-201ENST00000565542 1120 ntBASIC15.11■□□□□ 0.01
S1PR3Q99500 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.11■□□□□ 0.01
S1PR3Q99500 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
S1PR3Q99500 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S1PR3Q99500 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.1■□□□□ 0.01
S1PR3Q99500 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.1■□□□□ 0.01
S1PR3Q99500 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.1■□□□□ 0.01
S1PR3Q99500 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
S1PR3Q99500 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.1■□□□□ 0.01
S1PR3Q99500 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
S1PR3Q99500 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
S1PR3Q99500 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.1■□□□□ 0.01
S1PR3Q99500 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.1■□□□□ 0.01
S1PR3Q99500 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.1■□□□□ 0.01
S1PR3Q99500 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.1■□□□□ 0.01
S1PR3Q99500 AC116562.4-202ENST00000641738 218 ntBASIC15.1■□□□□ 0.01
S1PR3Q99500 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
S1PR3Q99500 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.1■□□□□ 0.01
S1PR3Q99500 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
S1PR3Q99500 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
S1PR3Q99500 NOC2LP2-201ENST00000407594 1944 ntBASIC15.09■□□□□ 0.01
S1PR3Q99500 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
S1PR3Q99500 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
S1PR3Q99500 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
S1PR3Q99500 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.09■□□□□ 0.01
S1PR3Q99500 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.09■□□□□ 0.01
S1PR3Q99500 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
S1PR3Q99500 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
S1PR3Q99500 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.09■□□□□ 0.01
S1PR3Q99500 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.09■□□□□ 0.01
S1PR3Q99500 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.09■□□□□ 0.01
S1PR3Q99500 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.09■□□□□ 0.01
S1PR3Q99500 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.09■□□□□ 0.01
S1PR3Q99500 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
S1PR3Q99500 AL353719.1-201ENST00000566847 864 ntBASIC15.09■□□□□ 0.01
S1PR3Q99500 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.09■□□□□ 0.01
S1PR3Q99500 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
S1PR3Q99500 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms