Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 AC135050.7-201ENST00000624508 2218 ntBASIC19.37■□□□□ 0.69
TWNKQ96RR1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TWNKQ96RR1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.37■□□□□ 0.69
TWNKQ96RR1 AC132938.6-201ENST00000623828 1655 ntBASIC19.36■□□□□ 0.69
TWNKQ96RR1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 Z83836.1-201ENST00000624605 1642 ntBASIC19.36■□□□□ 0.69
TWNKQ96RR1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 LINC00167-201ENST00000530583 1419 ntBASIC19.36■□□□□ 0.69
TWNKQ96RR1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 IER3-202ENST00000376377 1350 ntBASIC19.36■□□□□ 0.69
TWNKQ96RR1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 AL390719.2-201ENST00000606993 987 ntBASIC19.36■□□□□ 0.69
TWNKQ96RR1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TWNKQ96RR1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TWNKQ96RR1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 AC011498.5-201ENST00000592027 486 ntBASIC19.35■□□□□ 0.69
TWNKQ96RR1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 AP000550.4-202ENST00000639755 178 ntBASIC19.35■□□□□ 0.69
TWNKQ96RR1 LINC00602-201ENST00000629776 2065 ntBASIC19.35■□□□□ 0.69
TWNKQ96RR1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 AL354751.1-201ENST00000412768 1863 ntBASIC19.35■□□□□ 0.69
TWNKQ96RR1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TWNKQ96RR1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TWNKQ96RR1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 AC093010.1-201ENST00000473625 1624 ntBASIC19.34■□□□□ 0.69
TWNKQ96RR1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 AC113404.2-201ENST00000507884 177 ntBASIC19.34■□□□□ 0.69
TWNKQ96RR1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.34■□□□□ 0.69
TWNKQ96RR1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TWNKQ96RR1 REXO1L9P-201ENST00000604264 2108 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms