Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 AC019069.1-201ENST00000610008 1333 ntBASIC17.23■□□□□ 0.35
NR1H4Q96RI1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 AC112777.1-201ENST00000540175 1423 ntBASIC17.23■□□□□ 0.35
NR1H4Q96RI1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 UBE2DNL-204ENST00000602536 740 ntBASIC17.23■□□□□ 0.35
NR1H4Q96RI1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H4Q96RI1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.22■□□□□ 0.35
NR1H4Q96RI1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H4Q96RI1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 AC106886.4-201ENST00000623557 2502 ntBASIC17.21■□□□□ 0.35
NR1H4Q96RI1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.21■□□□□ 0.35
NR1H4Q96RI1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms