Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 AC087623.3-201ENST00000607047 1098 ntBASIC13.83□□□□□ -0.2
AP1S3Q96PC3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.83□□□□□ -0.2
AP1S3Q96PC3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S3Q96PC3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 SIRPAP1-201ENST00000448467 1770 ntBASIC13.82□□□□□ -0.2
AP1S3Q96PC3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AP1S3Q96PC3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms