Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 MTMR9LP-203ENST00000426597 1545 ntBASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN4Q96NY8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 AC112482.1-201ENST00000492080 688 ntBASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 AC012640.2-201ENST00000561606 901 ntBASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 AC112907.3-201ENST00000577781 2400 ntBASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
NECTIN4Q96NY8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 RPS8P6-201ENST00000426177 609 ntBASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC004832.2-201ENST00000426397 482 ntBASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC002347.1-201ENST00000569543 541 ntBASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC027796.2-201ENST00000575326 344 ntBASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 LINC01006-201ENST00000333319 2292 ntBASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN4Q96NY8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 AC107918.4-202ENST00000641623 219 ntBASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms