Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 AC120498.9-201ENST00000339021 3867 ntBASIC18.3■□□□□ 0.52
SIPA1Q96FS4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 BNIP3P18-201ENST00000593976 575 ntBASIC18.3■□□□□ 0.52
SIPA1Q96FS4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 AL591684.3-201ENST00000605187 298 ntBASIC18.3■□□□□ 0.52
SIPA1Q96FS4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.29■□□□□ 0.52
SIPA1Q96FS4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 AC096582.2-201ENST00000510860 516 ntBASIC18.29■□□□□ 0.52
SIPA1Q96FS4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
SIPA1Q96FS4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 MRPL3P1-201ENST00000400109 1033 ntBASIC18.28■□□□□ 0.52
SIPA1Q96FS4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 AF238378.1-201ENST00000526806 358 ntBASIC18.28■□□□□ 0.52
SIPA1Q96FS4 MIR5100-201ENST00000579544 119 ntBASIC18.28■□□□□ 0.52
SIPA1Q96FS4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
SIPA1Q96FS4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 AL024508.2-201ENST00000607749 1894 ntBASIC18.27■□□□□ 0.52
SIPA1Q96FS4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms