Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 AC005332.1-201ENST00000577698 1310 ntBASIC19.19■□□□□ 0.66
RNF139Q8WU17 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF139Q8WU17 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF139Q8WU17 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 AC099343.3-201ENST00000605834 2503 ntBASIC19.18■□□□□ 0.66
RNF139Q8WU17 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 AL645929.1-201ENST00000420084 975 ntBASIC19.18■□□□□ 0.66
RNF139Q8WU17 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 AP000550.4-202ENST00000639755 178 ntBASIC19.18■□□□□ 0.66
RNF139Q8WU17 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF139Q8WU17 IER3-202ENST00000376377 1350 ntBASIC19.18■□□□□ 0.66
RNF139Q8WU17 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF139Q8WU17 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 SPDYE13P-201ENST00000445314 798 ntBASIC19.17■□□□□ 0.66
RNF139Q8WU17 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF139Q8WU17 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF139Q8WU17 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms