Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 IGHV3-47-201ENST00000425060 335 ntBASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 VENTXP7-201ENST00000475503 772 ntBASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 AC091607.1-201ENST00000490318 1060 ntBASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 AP005901.3-202ENST00000581653 237 ntBASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3RF2Q8TEC5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 AL499627.1-201ENST00000569373 2188 ntBASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 SDHAP2-201ENST00000455183 2001 ntBASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3RF2Q8TEC5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 NSUN5P1-202ENST00000421140 1535 ntBASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 NSUN5P2-203ENST00000457352 1529 ntBASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 AC011840.4-201ENST00000578471 627 ntBASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 AC008687.5-201ENST00000593746 558 ntBASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3RF2Q8TEC5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms