Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 AC112777.1-201ENST00000540175 1423 ntBASIC17.21■□□□□ 0.34
SNIP1Q8TAD8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SNIP1Q8TAD8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SNIP1Q8TAD8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
SNIP1Q8TAD8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNIP1Q8TAD8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 GABARAPL3-202ENST00000624044 1851 ntBASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 AC005336.2-201ENST00000593183 939 ntBASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 AC134684.3-201ENST00000641758 218 ntBASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SNIP1Q8TAD8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 AC099778.1-201ENST00000568593 1911 ntBASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 AC004832.2-201ENST00000426397 482 ntBASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 AC009533.2-201ENST00000543664 586 ntBASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms