Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.64■□□□□ 0.73
SMG8Q8ND04 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.64■□□□□ 0.73
SMG8Q8ND04 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.64■□□□□ 0.73
SMG8Q8ND04 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.64■□□□□ 0.73
SMG8Q8ND04 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.64■□□□□ 0.73
SMG8Q8ND04 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.64■□□□□ 0.73
SMG8Q8ND04 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMG8Q8ND04 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMG8Q8ND04 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMG8Q8ND04 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMG8Q8ND04 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMG8Q8ND04 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMG8Q8ND04 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMG8Q8ND04 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMG8Q8ND04 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 GMCL1P1-201ENST00000463439 1581 ntBASIC19.62■□□□□ 0.73
SMG8Q8ND04 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 AP000974.1-201ENST00000623909 2387 ntBASIC19.62■□□□□ 0.73
SMG8Q8ND04 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 AL160237.2-201ENST00000556165 472 ntBASIC19.62■□□□□ 0.73
SMG8Q8ND04 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 MIR5100-201ENST00000579544 119 ntBASIC19.62■□□□□ 0.73
SMG8Q8ND04 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 REXO1L6P-202ENST00000619970 1078 ntBASIC19.62■□□□□ 0.73
SMG8Q8ND04 ESPNP-201ENST00000270691 2015 ntBASIC19.62■□□□□ 0.73
SMG8Q8ND04 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMG8Q8ND04 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.62■□□□□ 0.73
SMG8Q8ND04 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 KRT18P65-201ENST00000439811 1286 ntBASIC19.61■□□□□ 0.73
SMG8Q8ND04 AC096582.2-201ENST00000510860 516 ntBASIC19.61■□□□□ 0.73
SMG8Q8ND04 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.61■□□□□ 0.73
SMG8Q8ND04 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMG8Q8ND04 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMG8Q8ND04 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 AF238378.1-201ENST00000526806 358 ntBASIC19.6■□□□□ 0.73
SMG8Q8ND04 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.6■□□□□ 0.73
SMG8Q8ND04 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms