Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC011558.1-201ENST00000623459 338 ntBASIC18.78■□□□□ 0.6
PAF1Q8N7H5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PAF1Q8N7H5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.77■□□□□ 0.6
PAF1Q8N7H5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PAF1Q8N7H5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PAF1Q8N7H5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.77■□□□□ 0.59
PAF1Q8N7H5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PAF1Q8N7H5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PAF1Q8N7H5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PAF1Q8N7H5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 MTMR9LP-203ENST00000426597 1545 ntBASIC18.76■□□□□ 0.59
PAF1Q8N7H5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 TSPY5P-201ENST00000426936 936 ntBASIC18.76■□□□□ 0.59
PAF1Q8N7H5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 AL359075.1-203ENST00000462729 1002 ntBASIC18.76■□□□□ 0.59
PAF1Q8N7H5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 GCSHP2-201ENST00000560971 527 ntBASIC18.76■□□□□ 0.59
PAF1Q8N7H5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 AL590326.2-201ENST00000625139 305 ntBASIC18.76■□□□□ 0.59
PAF1Q8N7H5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PAF1Q8N7H5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 AC098818.2-201ENST00000564925 2320 ntBASIC18.75■□□□□ 0.59
PAF1Q8N7H5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms