Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 C1QL1P1-201ENST00000568105 661 ntBASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRLF3Q8IUI8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 KRT17P2-201ENST00000300992 1314 ntBASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 AF186192.3-201ENST00000583427 947 ntBASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRLF3Q8IUI8 FLJ13224-201ENST00000313737 1514 ntBASIC18.27■□□□□ 0.51
CRLF3Q8IUI8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.27■□□□□ 0.51
CRLF3Q8IUI8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CRLF3Q8IUI8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CRLF3Q8IUI8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CRLF3Q8IUI8 AC012317.2-201ENST00000623305 2251 ntBASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 MIR4785-201ENST00000585005 73 ntBASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CRLF3Q8IUI8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms