Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 KRT18P57-201ENST00000443599 1254 ntBASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 HOMER2P1-201ENST00000455653 964 ntBASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 AC113404.2-201ENST00000507884 177 ntBASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
COLCA1Q6ZS62 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 AL391807.1-203ENST00000604392 2365 ntBASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 DUTP2-201ENST00000519164 463 ntBASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 AL136038.4-201ENST00000603606 1261 ntBASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
COLCA1Q6ZS62 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 AC008764.6-201ENST00000595909 2069 ntBASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 AC104076.2-201ENST00000448912 469 ntBASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
COLCA1Q6ZS62 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
COLCA1Q6ZS62 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COLCA1Q6ZS62 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COLCA1Q6ZS62 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.71■□□□□ 0.1
COLCA1Q6ZS62 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms