Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19■□□□□ 0.63
LRRC38Q5VT99 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 DUTP2-201ENST00000519164 463 ntBASIC18.99■□□□□ 0.63
LRRC38Q5VT99 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC38Q5VT99 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 AC008687.5-201ENST00000593746 558 ntBASIC18.98■□□□□ 0.63
LRRC38Q5VT99 AC024243.1-201ENST00000609234 778 ntBASIC18.98■□□□□ 0.63
LRRC38Q5VT99 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC38Q5VT99 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 ECEL1P2-202ENST00000465689 757 ntBASIC18.97■□□□□ 0.63
LRRC38Q5VT99 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 MIR3917-201ENST00000580971 93 ntBASIC18.97■□□□□ 0.63
LRRC38Q5VT99 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
LRRC38Q5VT99 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC38Q5VT99 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC38Q5VT99 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC38Q5VT99 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC38Q5VT99 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRRC38Q5VT99 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC38Q5VT99 AP000523.1-201ENST00000398242 1049 ntBASIC18.96■□□□□ 0.63
LRRC38Q5VT99 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms