Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 CLEC4GP1-201ENST00000596555 870 ntBASIC16.03■□□□□ 0.16
FREM1Q5H8C1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 AC009102.3-201ENST00000623118 1491 ntBASIC16.03■□□□□ 0.16
FREM1Q5H8C1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 AP003733.1-201ENST00000491725 852 ntBASIC16.03■□□□□ 0.16
FREM1Q5H8C1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 TOB2P1-201ENST00000469761 992 ntBASIC16.02■□□□□ 0.16
FREM1Q5H8C1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 AC012313.10-201ENST00000623509 926 ntBASIC16.02■□□□□ 0.16
FREM1Q5H8C1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
FREM1Q5H8C1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 AC246785.2-201ENST00000432512 513 ntBASIC16.02■□□□□ 0.15
FREM1Q5H8C1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
FREM1Q5H8C1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 AC112777.1-201ENST00000540175 1423 ntBASIC16.01■□□□□ 0.15
FREM1Q5H8C1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 PHGDH-209ENST00000641074 1780 ntBASIC16.01■□□□□ 0.15
FREM1Q5H8C1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM1Q5H8C1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms