Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PRICKLE4Q2TBC4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRICKLE4Q2TBC4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE4Q2TBC4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE4Q2TBC4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE4Q2TBC4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRICKLE4Q2TBC4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 KRT89P-201ENST00000620027 1478 ntBASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE4Q2TBC4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 LINC01311-201ENST00000565162 1445 ntBASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 AL049597.2-201ENST00000565575 961 ntBASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE4Q2TBC4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms