Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SMIM11AP58511 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.88■□□□□ 0.29
SMIM11AP58511 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 AC008622.2-201ENST00000617006 1229 ntBASIC16.88■□□□□ 0.29
SMIM11AP58511 AC073648.6-201ENST00000641589 218 ntBASIC16.88■□□□□ 0.29
SMIM11AP58511 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SMIM11AP58511 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 PHGDH-209ENST00000641074 1780 ntBASIC16.87■□□□□ 0.29
SMIM11AP58511 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM11AP58511 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM11AP58511 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.87■□□□□ 0.29
SMIM11AP58511 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM11AP58511 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMIM11AP58511 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM11AP58511 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.87■□□□□ 0.29
SMIM11AP58511 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM11AP58511 AC092666.2-201ENST00000613287 246 ntBASIC16.87■□□□□ 0.29
SMIM11AP58511 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.87■□□□□ 0.29
SMIM11AP58511 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM11AP58511 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMIM11AP58511 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.87■□□□□ 0.29
SMIM11AP58511 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.87■□□□□ 0.29
SMIM11AP58511 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM11AP58511 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM11AP58511 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.86■□□□□ 0.29
SMIM11AP58511 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM11AP58511 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 KRT18P6-201ENST00000555540 1265 ntBASIC16.86■□□□□ 0.29
SMIM11AP58511 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM11AP58511 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM11AP58511 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SMIM11AP58511 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SMIM11AP58511 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM11AP58511 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SMIM11AP58511 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SMIM11AP58511 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMIM11AP58511 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMIM11AP58511 MIR149-201ENST00000384879 89 ntBASIC16.85■□□□□ 0.29
SMIM11AP58511 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.85■□□□□ 0.29
SMIM11AP58511 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM11AP58511 AC006058.3-201ENST00000606217 1069 ntBASIC16.85■□□□□ 0.29
SMIM11AP58511 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.85■□□□□ 0.29
SMIM11AP58511 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM11AP58511 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM11AP58511 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms