Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH11P55287 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDH11P55287 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH11P55287 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDH11P55287 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH11P55287 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH11P55287 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH11P55287 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CDH11P55287 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 LINC01568-207ENST00000641790 1380 ntBASIC16.77■□□□□ 0.28
CDH11P55287 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 AC134043.2-201ENST00000624206 2238 ntBASIC16.77■□□□□ 0.28
CDH11P55287 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CDH11P55287 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH11P55287 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH11P55287 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 DGCR10-201ENST00000609839 495 ntBASIC16.77■□□□□ 0.28
CDH11P55287 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH11P55287 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH11P55287 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.77■□□□□ 0.27
CDH11P55287 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH11P55287 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDH11P55287 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.76■□□□□ 0.27
CDH11P55287 RCN1P1-201ENST00000400413 996 ntBASIC16.76■□□□□ 0.27
CDH11P55287 MESTP1-201ENST00000404287 994 ntBASIC16.76■□□□□ 0.27
CDH11P55287 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH11P55287 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 KRT8P45-201ENST00000414328 1447 ntBASIC16.76■□□□□ 0.27
CDH11P55287 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH11P55287 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH11P55287 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.76■□□□□ 0.27
CDH11P55287 AC093677.2-201ENST00000600169 1863 ntBASIC16.76■□□□□ 0.27
CDH11P55287 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH11P55287 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH11P55287 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CDH11P55287 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH11P55287 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms