Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AL161938.1-201ENST00000569833 2180 ntBASIC20■□□□□ 0.79
CDR1P51861 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20■□□□□ 0.79
CDR1P51861 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
CDR1P51861 COPE-203ENST00000351079 907 ntTSL 2 BASIC20■□□□□ 0.79
CDR1P51861 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDR1P51861 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20■□□□□ 0.79
CDR1P51861 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20■□□□□ 0.79
CDR1P51861 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CDR1P51861 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 AC008556.1-201ENST00000610908 2040 ntBASIC20■□□□□ 0.79
CDR1P51861 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CDR1P51861 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDR1P51861 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.99■□□□□ 0.79
CDR1P51861 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.99■□□□□ 0.79
CDR1P51861 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.99■□□□□ 0.79
CDR1P51861 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDR1P51861 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
CDR1P51861 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDR1P51861 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.99■□□□□ 0.79
CDR1P51861 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.99■□□□□ 0.79
CDR1P51861 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CDR1P51861 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDR1P51861 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.99■□□□□ 0.79
CDR1P51861 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.99■□□□□ 0.79
CDR1P51861 AC024243.1-201ENST00000609234 778 ntBASIC19.99■□□□□ 0.79
CDR1P51861 AL358472.4-201ENST00000633140 710 ntBASIC19.99■□□□□ 0.79
CDR1P51861 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDR1P51861 CROCCP3-202ENST00000420820 1947 ntBASIC19.99■□□□□ 0.79
CDR1P51861 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.99■□□□□ 0.79
CDR1P51861 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDR1P51861 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDR1P51861 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.98■□□□□ 0.79
CDR1P51861 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDR1P51861 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.98■□□□□ 0.79
CDR1P51861 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.98■□□□□ 0.79
CDR1P51861 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.98■□□□□ 0.79
CDR1P51861 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.98■□□□□ 0.79
CDR1P51861 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDR1P51861 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDR1P51861 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CDR1P51861 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 RCC2P3-201ENST00000418112 1537 ntBASIC19.97■□□□□ 0.79
CDR1P51861 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms