Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.63■□□□□ 0.89
USP11P51784 AC135776.1-201ENST00000319817 2481 ntBASIC20.63■□□□□ 0.89
USP11P51784 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.63■□□□□ 0.89
USP11P51784 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
USP11P51784 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 BX276092.5-203ENST00000456199 560 ntBASIC20.63■□□□□ 0.89
USP11P51784 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.63■□□□□ 0.89
USP11P51784 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
USP11P51784 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.63■□□□□ 0.89
USP11P51784 AL121672.3-201ENST00000608644 468 ntBASIC20.63■□□□□ 0.89
USP11P51784 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.63■□□□□ 0.89
USP11P51784 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP11P51784 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
USP11P51784 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP11P51784 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.62■□□□□ 0.89
USP11P51784 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP11P51784 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 AC016734.2-201ENST00000624325 1377 ntBASIC20.62■□□□□ 0.89
USP11P51784 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP11P51784 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.62■□□□□ 0.89
USP11P51784 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
USP11P51784 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.62■□□□□ 0.89
USP11P51784 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.62■□□□□ 0.89
USP11P51784 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.62■□□□□ 0.89
USP11P51784 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.62■□□□□ 0.89
USP11P51784 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP11P51784 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 LINC00167-201ENST00000530583 1419 ntBASIC20.61■□□□□ 0.89
USP11P51784 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 AC093010.1-201ENST00000473625 1624 ntBASIC20.61■□□□□ 0.89
USP11P51784 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.61■□□□□ 0.89
USP11P51784 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.61■□□□□ 0.89
USP11P51784 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.61■□□□□ 0.89
USP11P51784 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.61■□□□□ 0.89
USP11P51784 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP11P51784 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.61■□□□□ 0.89
USP11P51784 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.61■□□□□ 0.89
USP11P51784 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
USP11P51784 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
USP11P51784 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP11P51784 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP11P51784 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.6■□□□□ 0.89
USP11P51784 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.6■□□□□ 0.89
USP11P51784 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.6■□□□□ 0.89
USP11P51784 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
USP11P51784 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.6■□□□□ 0.89
USP11P51784 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.6■□□□□ 0.89
USP11P51784 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.6■□□□□ 0.89
USP11P51784 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.6■□□□□ 0.89
USP11P51784 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.6■□□□□ 0.89
USP11P51784 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP11P51784 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms