Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.95■□□□□ 0.78
CASP4P49662 AC009065.1-201ENST00000564055 1225 ntBASIC19.95■□□□□ 0.78
CASP4P49662 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.95■□□□□ 0.78
CASP4P49662 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
CASP4P49662 AC079602.3-201ENST00000623931 403 ntBASIC19.95■□□□□ 0.78
CASP4P49662 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.95■□□□□ 0.78
CASP4P49662 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
CASP4P49662 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.95■□□□□ 0.78
CASP4P49662 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.95■□□□□ 0.78
CASP4P49662 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASP4P49662 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASP4P49662 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASP4P49662 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CASP4P49662 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.94■□□□□ 0.78
CASP4P49662 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
CASP4P49662 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.94■□□□□ 0.78
CASP4P49662 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASP4P49662 KRT18P38-201ENST00000449496 1282 ntBASIC19.94■□□□□ 0.78
CASP4P49662 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CASP4P49662 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASP4P49662 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.94■□□□□ 0.78
CASP4P49662 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.94■□□□□ 0.78
CASP4P49662 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASP4P49662 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.94■□□□□ 0.78
CASP4P49662 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CASP4P49662 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.93■□□□□ 0.78
CASP4P49662 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CASP4P49662 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CASP4P49662 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 TSPY5P-201ENST00000426936 936 ntBASIC19.93■□□□□ 0.78
CASP4P49662 RASA4DP-201ENST00000460726 1199 ntBASIC19.93■□□□□ 0.78
CASP4P49662 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.93■□□□□ 0.78
CASP4P49662 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.93■□□□□ 0.78
CASP4P49662 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.93■□□□□ 0.78
CASP4P49662 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CASP4P49662 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.93■□□□□ 0.78
CASP4P49662 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CASP4P49662 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASP4P49662 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
CASP4P49662 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.92■□□□□ 0.78
CASP4P49662 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.92■□□□□ 0.78
CASP4P49662 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CASP4P49662 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.92■□□□□ 0.78
CASP4P49662 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.92■□□□□ 0.78
CASP4P49662 PVRIG2P-201ENST00000435460 978 ntBASIC19.92■□□□□ 0.78
CASP4P49662 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.92■□□□□ 0.78
CASP4P49662 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.92■□□□□ 0.78
CASP4P49662 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CASP4P49662 AL031432.5-201ENST00000641059 760 ntBASIC19.92■□□□□ 0.78
CASP4P49662 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.92■□□□□ 0.78
CASP4P49662 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CASP4P49662 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CASP4P49662 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms