Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PCP4P48539 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PCP4P48539 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PCP4P48539 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PCP4P48539 AL031598.1-201ENST00000561511 1773 ntBASIC12.57□□□□□ -0.4
PCP4P48539 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.57□□□□□ -0.4
PCP4P48539 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.57□□□□□ -0.4
PCP4P48539 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.57□□□□□ -0.4
PCP4P48539 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
PCP4P48539 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PCP4P48539 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
PCP4P48539 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCP4P48539 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PCP4P48539 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.56□□□□□ -0.4
PCP4P48539 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.56□□□□□ -0.4
PCP4P48539 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PCP4P48539 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.56□□□□□ -0.4
PCP4P48539 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
PCP4P48539 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCP4P48539 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
PCP4P48539 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC12.55□□□□□ -0.4
PCP4P48539 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PCP4P48539 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.55□□□□□ -0.4
PCP4P48539 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
PCP4P48539 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PCP4P48539 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PCP4P48539 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms