Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.93□□□□□ -0.02
CEACAM3P40198 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CEACAM3P40198 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.93□□□□□ -0.02
CEACAM3P40198 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 AL499627.1-201ENST00000569373 2188 ntBASIC14.93□□□□□ -0.02
CEACAM3P40198 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.93□□□□□ -0.02
CEACAM3P40198 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CEACAM3P40198 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 STARP1-201ENST00000397973 869 ntBASIC14.93□□□□□ -0.02
CEACAM3P40198 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.93□□□□□ -0.02
CEACAM3P40198 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.93□□□□□ -0.02
CEACAM3P40198 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CEACAM3P40198 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CEACAM3P40198 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.93□□□□□ -0.02
CEACAM3P40198 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.93□□□□□ -0.02
CEACAM3P40198 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.93□□□□□ -0.02
CEACAM3P40198 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CEACAM3P40198 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CEACAM3P40198 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.92□□□□□ -0.02
CEACAM3P40198 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 AL441883.1-201ENST00000566170 1045 ntBASIC14.92□□□□□ -0.02
CEACAM3P40198 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.92□□□□□ -0.02
CEACAM3P40198 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.92□□□□□ -0.02
CEACAM3P40198 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.92□□□□□ -0.02
CEACAM3P40198 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
CEACAM3P40198 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CEACAM3P40198 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CEACAM3P40198 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CEACAM3P40198 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CEACAM3P40198 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.92□□□□□ -0.02
CEACAM3P40198 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CEACAM3P40198 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CEACAM3P40198 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CEACAM3P40198 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.91□□□□□ -0.02
CEACAM3P40198 RASA4DP-201ENST00000460726 1199 ntBASIC14.91□□□□□ -0.02
CEACAM3P40198 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.91□□□□□ -0.02
CEACAM3P40198 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.91□□□□□ -0.02
CEACAM3P40198 AC126763.1-201ENST00000552015 2118 ntBASIC14.91□□□□□ -0.02
CEACAM3P40198 AL049597.2-201ENST00000565575 961 ntBASIC14.91□□□□□ -0.02
CEACAM3P40198 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CEACAM3P40198 AC006011.2-201ENST00000621313 1158 ntBASIC14.91□□□□□ -0.02
CEACAM3P40198 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms