Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCK1P35558 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCK1P35558 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCK1P35558 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCK1P35558 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.25■□□□□ 0.67
PCK1P35558 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCK1P35558 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCK1P35558 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.25■□□□□ 0.67
PCK1P35558 AL512604.3-201ENST00000569583 964 ntBASIC19.25■□□□□ 0.67
PCK1P35558 MIR3180-4-201ENST00000582223 153 ntBASIC19.25■□□□□ 0.67
PCK1P35558 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.25■□□□□ 0.67
PCK1P35558 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCK1P35558 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PCK1P35558 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCK1P35558 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 AC093677.2-201ENST00000600169 1863 ntBASIC19.24■□□□□ 0.67
PCK1P35558 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.24■□□□□ 0.67
PCK1P35558 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.24■□□□□ 0.67
PCK1P35558 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCK1P35558 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.24■□□□□ 0.67
PCK1P35558 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCK1P35558 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCK1P35558 MIR149-201ENST00000384879 89 ntBASIC19.24■□□□□ 0.67
PCK1P35558 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.24■□□□□ 0.67
PCK1P35558 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 HMGA1P5-201ENST00000412453 271 ntBASIC19.24■□□□□ 0.67
PCK1P35558 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.24■□□□□ 0.67
PCK1P35558 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.24■□□□□ 0.67
PCK1P35558 AC104390.1-201ENST00000555663 520 ntBASIC19.24■□□□□ 0.67
PCK1P35558 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.24■□□□□ 0.67
PCK1P35558 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.24■□□□□ 0.67
PCK1P35558 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 AC112497.1-201ENST00000624824 639 ntBASIC19.24■□□□□ 0.67
PCK1P35558 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
PCK1P35558 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
PCK1P35558 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCK1P35558 OR6D1P-202ENST00000641007 5290 ntBASIC19.24■□□□□ 0.67
PCK1P35558 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PCK1P35558 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCK1P35558 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 NOC2LP1-202ENST00000452600 2235 ntBASIC19.24■□□□□ 0.67
PCK1P35558 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
PCK1P35558 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCK1P35558 AC135776.1-201ENST00000319817 2481 ntBASIC19.24■□□□□ 0.67
PCK1P35558 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.23■□□□□ 0.67
PCK1P35558 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCK1P35558 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.23■□□□□ 0.67
PCK1P35558 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PCK1P35558 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.23■□□□□ 0.67
PCK1P35558 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCK1P35558 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCK1P35558 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PCK1P35558 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.23■□□□□ 0.67
PCK1P35558 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 SDHAP2-201ENST00000455183 2001 ntBASIC19.23■□□□□ 0.67
PCK1P35558 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCK1P35558 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms