Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT9P35527 KRT17P2-201ENST00000300992 1314 ntBASIC20.03■□□□□ 0.8
KRT9P35527 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 FLJ13224-201ENST00000313737 1514 ntBASIC20.03■□□□□ 0.8
KRT9P35527 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT9P35527 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT9P35527 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT9P35527 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT9P35527 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT9P35527 AC008622.2-201ENST00000617006 1229 ntBASIC20.03■□□□□ 0.8
KRT9P35527 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
KRT9P35527 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
KRT9P35527 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT9P35527 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT9P35527 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT9P35527 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT9P35527 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
KRT9P35527 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT9P35527 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 AL096828.2-201ENST00000567259 1965 ntBASIC20.02■□□□□ 0.8
KRT9P35527 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT9P35527 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT9P35527 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.02■□□□□ 0.79
KRT9P35527 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.02■□□□□ 0.79
KRT9P35527 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT9P35527 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRT9P35527 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
KRT9P35527 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT9P35527 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT9P35527 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KRT9P35527 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
KRT9P35527 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
KRT9P35527 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KRT9P35527 RBM17P1-201ENST00000453646 1190 ntBASIC20.01■□□□□ 0.79
KRT9P35527 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.01■□□□□ 0.79
KRT9P35527 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.01■□□□□ 0.79
KRT9P35527 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
KRT9P35527 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT9P35527 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT9P35527 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT9P35527 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20■□□□□ 0.79
KRT9P35527 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT9P35527 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRT9P35527 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20■□□□□ 0.79
KRT9P35527 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT9P35527 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20■□□□□ 0.79
KRT9P35527 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KRT9P35527 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT9P35527 MIR564-202ENST00000385049 94 ntBASIC20■□□□□ 0.79
KRT9P35527 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KRT9P35527 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20■□□□□ 0.79
KRT9P35527 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
KRT9P35527 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KRT9P35527 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KRT9P35527 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20■□□□□ 0.79
KRT9P35527 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT9P35527 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT9P35527 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms