Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.29■□□□□ 0.68
RFC1P35251 AC010240.3-201ENST00000607688 395 ntBASIC19.29■□□□□ 0.68
RFC1P35251 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.29■□□□□ 0.68
RFC1P35251 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 AC018470.1-201ENST00000624790 3129 ntBASIC19.29■□□□□ 0.68
RFC1P35251 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RFC1P35251 GMCL1P1-201ENST00000463439 1581 ntBASIC19.28■□□□□ 0.68
RFC1P35251 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFC1P35251 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.28■□□□□ 0.68
RFC1P35251 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RFC1P35251 MIR3180-4-201ENST00000582223 153 ntBASIC19.28■□□□□ 0.68
RFC1P35251 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.28■□□□□ 0.68
RFC1P35251 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFC1P35251 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RFC1P35251 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC1P35251 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.28■□□□□ 0.68
RFC1P35251 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.28■□□□□ 0.68
RFC1P35251 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFC1P35251 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.27■□□□□ 0.68
RFC1P35251 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 AC211429.1-201ENST00000415277 523 ntBASIC19.27■□□□□ 0.68
RFC1P35251 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.27■□□□□ 0.68
RFC1P35251 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RFC1P35251 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RFC1P35251 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.27■□□□□ 0.68
RFC1P35251 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RFC1P35251 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC1P35251 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.27■□□□□ 0.67
RFC1P35251 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFC1P35251 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.27■□□□□ 0.67
RFC1P35251 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFC1P35251 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFC1P35251 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFC1P35251 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.26■□□□□ 0.67
RFC1P35251 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.26■□□□□ 0.67
RFC1P35251 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.26■□□□□ 0.67
RFC1P35251 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.26■□□□□ 0.67
RFC1P35251 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RFC1P35251 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 NOC2LP1-202ENST00000452600 2235 ntBASIC19.26■□□□□ 0.67
RFC1P35251 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.26■□□□□ 0.67
RFC1P35251 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC1P35251 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RFC1P35251 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms