Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.99■□□□□ 0.47
VARSP26640 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
VARSP26640 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.98■□□□□ 0.47
VARSP26640 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
VARSP26640 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 AC007663.1-201ENST00000438948 1240 ntBASIC17.98■□□□□ 0.47
VARSP26640 BX664615.1-201ENST00000443558 458 ntBASIC17.98■□□□□ 0.47
VARSP26640 CCR12P-201ENST00000446203 998 ntBASIC17.98■□□□□ 0.47
VARSP26640 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 AC116562.4-202ENST00000641738 218 ntBASIC17.98■□□□□ 0.47
VARSP26640 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
VARSP26640 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VARSP26640 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARSP26640 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
VARSP26640 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
VARSP26640 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
VARSP26640 AC036111.1-201ENST00000533973 1582 ntBASIC17.97■□□□□ 0.47
VARSP26640 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VARSP26640 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 TSPY14P-201ENST00000303979 915 ntBASIC17.97■□□□□ 0.47
VARSP26640 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.97■□□□□ 0.47
VARSP26640 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.97■□□□□ 0.47
VARSP26640 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.97■□□□□ 0.47
VARSP26640 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.97■□□□□ 0.47
VARSP26640 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARSP26640 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.97■□□□□ 0.47
VARSP26640 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.97■□□□□ 0.47
VARSP26640 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VARSP26640 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
VARSP26640 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.47
VARSP26640 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.96■□□□□ 0.47
VARSP26640 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.96■□□□□ 0.47
VARSP26640 MIR564-202ENST00000385049 94 ntBASIC17.96■□□□□ 0.47
VARSP26640 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.96■□□□□ 0.47
VARSP26640 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.96■□□□□ 0.47
VARSP26640 AC104076.2-201ENST00000448912 469 ntBASIC17.96■□□□□ 0.47
VARSP26640 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VARSP26640 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.96■□□□□ 0.47
VARSP26640 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VARSP26640 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARSP26640 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
VARSP26640 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.96■□□□□ 0.46
VARSP26640 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.96■□□□□ 0.46
VARSP26640 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
VARSP26640 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms