Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.24■□□□□ 0.67
MMP8P22894 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP8P22894 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MMP8P22894 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 RASA4DP-201ENST00000460726 1199 ntBASIC19.23■□□□□ 0.67
MMP8P22894 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP8P22894 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP8P22894 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MMP8P22894 AC139887.4-201ENST00000607877 719 ntBASIC19.23■□□□□ 0.67
MMP8P22894 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP8P22894 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP8P22894 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP8P22894 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MMP8P22894 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
MMP8P22894 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP8P22894 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 SLC25A6P5-201ENST00000435663 894 ntBASIC19.22■□□□□ 0.67
MMP8P22894 YBX1P2-201ENST00000489612 999 ntBASIC19.22■□□□□ 0.67
MMP8P22894 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MMP8P22894 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MMP8P22894 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MMP8P22894 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP8P22894 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.22■□□□□ 0.67
MMP8P22894 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
MMP8P22894 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MMP8P22894 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MMP8P22894 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP8P22894 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
MMP8P22894 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP8P22894 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MMP8P22894 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MMP8P22894 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 AC117947.1-201ENST00000427448 529 ntBASIC19.21■□□□□ 0.67
MMP8P22894 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP8P22894 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP8P22894 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.21■□□□□ 0.67
MMP8P22894 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP8P22894 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MMP8P22894 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP8P22894 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP8P22894 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP8P22894 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP8P22894 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.2■□□□□ 0.66
MMP8P22894 SPDYE15P-201ENST00000424157 909 ntBASIC19.2■□□□□ 0.66
MMP8P22894 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.2■□□□□ 0.66
MMP8P22894 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.2■□□□□ 0.66
MMP8P22894 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.2■□□□□ 0.66
MMP8P22894 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP8P22894 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms