Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PCNAP12004 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNAP12004 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
PCNAP12004 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCNAP12004 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCNAP12004 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PCNAP12004 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCNAP12004 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PCNAP12004 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCNAP12004 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCNAP12004 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PCNAP12004 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.83■□□□□ 0.44
PCNAP12004 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCNAP12004 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.83■□□□□ 0.44
PCNAP12004 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCNAP12004 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PCNAP12004 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.83■□□□□ 0.44
PCNAP12004 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNAP12004 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
PCNAP12004 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCNAP12004 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PCNAP12004 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 TSPY14P-201ENST00000303979 915 ntBASIC17.82■□□□□ 0.44
PCNAP12004 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.82■□□□□ 0.44
PCNAP12004 INGX-201ENST00000359239 846 ntBASIC17.82■□□□□ 0.44
PCNAP12004 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.82■□□□□ 0.44
PCNAP12004 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.82■□□□□ 0.44
PCNAP12004 AC128688.1-201ENST00000487626 519 ntBASIC17.82■□□□□ 0.44
PCNAP12004 EGLN1P1-201ENST00000531623 762 ntBASIC17.82■□□□□ 0.44
PCNAP12004 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
PCNAP12004 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 CR769767.2-201ENST00000622735 460 ntBASIC17.82■□□□□ 0.44
PCNAP12004 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.82■□□□□ 0.44
PCNAP12004 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
PCNAP12004 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNAP12004 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 AC099343.3-201ENST00000605834 2503 ntBASIC17.81■□□□□ 0.44
PCNAP12004 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 KRT18P41-201ENST00000518924 1277 ntBASIC17.81■□□□□ 0.44
PCNAP12004 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 AC010947.1-201ENST00000623454 693 ntBASIC17.81■□□□□ 0.44
PCNAP12004 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.81■□□□□ 0.44
PCNAP12004 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.81■□□□□ 0.44
PCNAP12004 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.81■□□□□ 0.44
PCNAP12004 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PCNAP12004 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNAP12004 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCNAP12004 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCNAP12004 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCNAP12004 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.8■□□□□ 0.44
PCNAP12004 AP000593.1-201ENST00000393668 712 ntBASIC17.8■□□□□ 0.44
PCNAP12004 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms