Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.3□□□□□ -0.12
CD28P10747 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.3□□□□□ -0.12
CD28P10747 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD28P10747 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD28P10747 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CD28P10747 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CD28P10747 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CD28P10747 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CD28P10747 FAAHP1-202ENST00000446499 1238 ntBASIC14.29□□□□□ -0.12
CD28P10747 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CD28P10747 LINC01711-201ENST00000598340 967 ntBASIC14.29□□□□□ -0.12
CD28P10747 AL592071.1-201ENST00000611956 408 ntBASIC14.29□□□□□ -0.12
CD28P10747 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 AC233702.3-201ENST00000578656 1387 ntBASIC14.29□□□□□ -0.12
CD28P10747 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.29□□□□□ -0.12
CD28P10747 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD28P10747 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD28P10747 AL161938.1-201ENST00000569833 2180 ntBASIC14.29□□□□□ -0.12
CD28P10747 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.29□□□□□ -0.12
CD28P10747 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.29□□□□□ -0.12
CD28P10747 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CD28P10747 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 AL353692.3-201ENST00000407031 1396 ntBASIC14.28□□□□□ -0.12
CD28P10747 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 AL049812.1-201ENST00000432563 2267 ntBASIC14.28□□□□□ -0.12
CD28P10747 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 KRT18P31-201ENST00000506277 1292 ntBASIC14.28□□□□□ -0.12
CD28P10747 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.28□□□□□ -0.12
CD28P10747 Z69720.1-201ENST00000601483 472 ntBASIC14.28□□□□□ -0.12
CD28P10747 AC099336.1-202ENST00000602961 463 ntBASIC14.28□□□□□ -0.12
CD28P10747 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CD28P10747 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CD28P10747 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CD28P10747 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD28P10747 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.27□□□□□ -0.12
CD28P10747 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.27□□□□□ -0.12
CD28P10747 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CD28P10747 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.27□□□□□ -0.12
CD28P10747 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.27□□□□□ -0.12
CD28P10747 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CD28P10747 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms