Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.4□□□□□ -0.1
CSN3P07498 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CSN3P07498 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.4□□□□□ -0.1
CSN3P07498 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.4□□□□□ -0.1
CSN3P07498 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSN3P07498 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CSN3P07498 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.39□□□□□ -0.11
CSN3P07498 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CSN3P07498 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.39□□□□□ -0.11
CSN3P07498 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSN3P07498 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.39□□□□□ -0.11
CSN3P07498 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.39□□□□□ -0.11
CSN3P07498 AP003041.3-201ENST00000527151 707 ntBASIC14.39□□□□□ -0.11
CSN3P07498 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSN3P07498 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.39□□□□□ -0.11
CSN3P07498 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.39□□□□□ -0.11
CSN3P07498 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CSN3P07498 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSN3P07498 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 FEM1AP3-201ENST00000403722 1741 ntBASIC14.38□□□□□ -0.11
CSN3P07498 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 TERF1P1-201ENST00000311003 1181 ntBASIC14.38□□□□□ -0.11
CSN3P07498 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 LIN28AP1-201ENST00000429574 405 ntBASIC14.38□□□□□ -0.11
CSN3P07498 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.38□□□□□ -0.11
CSN3P07498 AC010203.1-204ENST00000548782 407 ntBASIC14.38□□□□□ -0.11
CSN3P07498 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CSN3P07498 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.38□□□□□ -0.11
CSN3P07498 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CSN3P07498 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 IRX1P1-201ENST00000438849 1838 ntBASIC14.38□□□□□ -0.11
CSN3P07498 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CSN3P07498 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.38□□□□□ -0.11
CSN3P07498 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSN3P07498 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms