Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.02■□□□□ 0.48
CAPN1P07384 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CAPN1P07384 AC022616.7-201ENST00000525383 220 ntBASIC18.02■□□□□ 0.48
CAPN1P07384 AP003041.3-201ENST00000527151 707 ntBASIC18.02■□□□□ 0.48
CAPN1P07384 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.02■□□□□ 0.48
CAPN1P07384 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CAPN1P07384 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CAPN1P07384 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CAPN1P07384 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CAPN1P07384 AL109659.2-201ENST00000606809 1674 ntBASIC18.02■□□□□ 0.47
CAPN1P07384 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CAPN1P07384 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.02■□□□□ 0.47
CAPN1P07384 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 FAM8A6P-201ENST00000407496 1135 ntBASIC18.01■□□□□ 0.47
CAPN1P07384 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 YBX1P2-201ENST00000489612 999 ntBASIC18.01■□□□□ 0.47
CAPN1P07384 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.01■□□□□ 0.47
CAPN1P07384 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CAPN1P07384 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.01■□□□□ 0.47
CAPN1P07384 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CAPN1P07384 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.01■□□□□ 0.47
CAPN1P07384 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN1P07384 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CAPN1P07384 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18■□□□□ 0.47
CAPN1P07384 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CAPN1P07384 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CAPN1P07384 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 RNF152P1-201ENST00000397754 604 ntBASIC18■□□□□ 0.47
CAPN1P07384 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18■□□□□ 0.47
CAPN1P07384 COX11P1-201ENST00000489116 835 ntBASIC18■□□□□ 0.47
CAPN1P07384 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18■□□□□ 0.47
CAPN1P07384 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 AC135776.1-201ENST00000319817 2481 ntBASIC18■□□□□ 0.47
CAPN1P07384 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CAPN1P07384 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN1P07384 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CAPN1P07384 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CAPN1P07384 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.99■□□□□ 0.47
CAPN1P07384 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.99■□□□□ 0.47
CAPN1P07384 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.99■□□□□ 0.47
CAPN1P07384 AC087388.1-201ENST00000571370 1112 ntBASIC17.99■□□□□ 0.47
CAPN1P07384 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CAPN1P07384 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.99■□□□□ 0.47
CAPN1P07384 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.99■□□□□ 0.47
CAPN1P07384 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN1P07384 MYLKP1-201ENST00000509077 1580 ntBASIC17.99■□□□□ 0.47
CAPN1P07384 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN1P07384 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms