Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFAP04085 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDGFAP04085 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFAP04085 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFAP04085 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFAP04085 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFAP04085 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFAP04085 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFAP04085 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFAP04085 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.08■□□□□ 0.33
PDGFAP04085 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFAP04085 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PDGFAP04085 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.08■□□□□ 0.32
PDGFAP04085 AL109659.2-201ENST00000606809 1674 ntBASIC17.08■□□□□ 0.32
PDGFAP04085 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PDGFAP04085 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.08■□□□□ 0.32
PDGFAP04085 AP003733.1-201ENST00000491725 852 ntBASIC17.08■□□□□ 0.32
PDGFAP04085 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.08■□□□□ 0.32
PDGFAP04085 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PDGFAP04085 AC104390.1-201ENST00000555663 520 ntBASIC17.08■□□□□ 0.32
PDGFAP04085 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.08■□□□□ 0.32
PDGFAP04085 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.08■□□□□ 0.32
PDGFAP04085 AL121912.1-201ENST00000603683 238 ntBASIC17.08■□□□□ 0.32
PDGFAP04085 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 IGHV3-41-201ENST00000613121 348 ntBASIC17.08■□□□□ 0.32
PDGFAP04085 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PDGFAP04085 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFAP04085 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDGFAP04085 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 AC233702.3-201ENST00000578656 1387 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 AKR1C7P-201ENST00000305623 895 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.07■□□□□ 0.32
PDGFAP04085 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 TSPY12P-201ENST00000421279 868 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.07■□□□□ 0.32
PDGFAP04085 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.07■□□□□ 0.32
PDGFAP04085 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.07■□□□□ 0.32
PDGFAP04085 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.07■□□□□ 0.32
PDGFAP04085 AC099336.1-202ENST00000602961 463 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 AL671883.3-201ENST00000603274 991 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 AL353801.3-201ENST00000609898 542 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 AL512353.2-201ENST00000448759 1962 ntBASIC17.07■□□□□ 0.32
PDGFAP04085 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PDGFAP04085 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFAP04085 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.07■□□□□ 0.32
PDGFAP04085 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFAP04085 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
PDGFAP04085 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms