Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 BID-214ENST00000617586 542 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 AC100791.3-201ENST00000617619 330 ntBASIC13.77□□□□□ -0.21
HLA-DQA1P01909 AC010536.3-201ENST00000620306 533 ntBASIC13.77□□□□□ -0.21
HLA-DQA1P01909 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA1P01909 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 AC006116.8-202ENST00000587620 1550 ntBASIC13.76□□□□□ -0.21
HLA-DQA1P01909 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 TSPY21P-201ENST00000433481 731 ntBASIC13.76□□□□□ -0.21
HLA-DQA1P01909 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 AL137784.2-201ENST00000607332 1000 ntBASIC13.76□□□□□ -0.21
HLA-DQA1P01909 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA1P01909 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA1P01909 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA1P01909 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HLA-DQA1P01909 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA1P01909 PCDHB19P-201ENST00000570871 2371 ntBASIC13.75□□□□□ -0.21
HLA-DQA1P01909 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms