Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN1O95832 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN1O95832 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 UPF3AP3-201ENST00000420996 769 ntBASIC16.32■□□□□ 0.2
CLDN1O95832 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN1O95832 RPS8P6-201ENST00000426177 609 ntBASIC16.32■□□□□ 0.2
CLDN1O95832 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 MINOS1P3-201ENST00000457048 203 ntBASIC16.32■□□□□ 0.2
CLDN1O95832 RN7SL606P-201ENST00000472779 293 ntBASIC16.32■□□□□ 0.2
CLDN1O95832 VENTXP7-201ENST00000475503 772 ntBASIC16.32■□□□□ 0.2
CLDN1O95832 GUSBP12-201ENST00000513727 720 ntBASIC16.32■□□□□ 0.2
CLDN1O95832 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN1O95832 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN1O95832 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN1O95832 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN1O95832 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN1O95832 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 BX323043.1-201ENST00000641006 1765 ntBASIC16.31■□□□□ 0.2
CLDN1O95832 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN1O95832 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CLDN1O95832 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CLDN1O95832 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.31■□□□□ 0.2
CLDN1O95832 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 AC010327.4-202ENST00000591484 748 ntBASIC16.31■□□□□ 0.2
CLDN1O95832 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN1O95832 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN1O95832 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN1O95832 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN1O95832 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN1O95832 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN1O95832 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN1O95832 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN1O95832 KRT18P23-201ENST00000435622 1283 ntBASIC16.3■□□□□ 0.2
CLDN1O95832 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN1O95832 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN1O95832 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN1O95832 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN1O95832 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN1O95832 AL591684.3-201ENST00000605187 298 ntBASIC16.3■□□□□ 0.2
CLDN1O95832 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN1O95832 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 FAM215A-202ENST00000632077 792 ntBASIC16.3■□□□□ 0.2
CLDN1O95832 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN1O95832 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 AC098818.2-201ENST00000564925 2320 ntBASIC16.29■□□□□ 0.2
CLDN1O95832 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN1O95832 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms