Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.33■□□□□ 0.04
SIX6O95475 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.33■□□□□ 0.04
SIX6O95475 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX6O95475 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX6O95475 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
SIX6O95475 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SIX6O95475 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SIX6O95475 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX6O95475 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX6O95475 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX6O95475 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.32■□□□□ 0.04
SIX6O95475 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SIX6O95475 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SIX6O95475 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SIX6O95475 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.32■□□□□ 0.04
SIX6O95475 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.32■□□□□ 0.04
SIX6O95475 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX6O95475 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 AC068338.2-201ENST00000563278 1430 ntBASIC15.32■□□□□ 0.04
SIX6O95475 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 KRT17P1-201ENST00000399211 1546 ntBASIC15.32■□□□□ 0.04
SIX6O95475 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SIX6O95475 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX6O95475 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX6O95475 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 LINC00554-201ENST00000564841 3011 ntBASIC15.31■□□□□ 0.04
SIX6O95475 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SIX6O95475 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SIX6O95475 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 AC110285.6-201ENST00000617652 491 ntBASIC15.31■□□□□ 0.04
SIX6O95475 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX6O95475 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SIX6O95475 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
SIX6O95475 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SIX6O95475 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX6O95475 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX6O95475 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX6O95475 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX6O95475 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX6O95475 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX6O95475 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms